Foto del docente

Emanuele Paci

Professore associato

Dipartimento di Fisica e Astronomia "Augusto Righi"

Settore scientifico disciplinare: PHYS-06/A Fisica per le scienze della vita, l’ambiente e i beni culturali

Pubblicazioni

West D.K.; Olmsted P.D.; Paci E., Mechanical unfolding revisited through a simple but realistic model, «THE JOURNAL OF CHEMICAL PHYSICS», 2006, 124, Article number: 154909, pp. 1 - 8 [articolo]

Neelov I.M.; Adolf D.B.; McLeish T.C.B.; Paci E., Molecular dynamics simulation of dextran extension by constant force in single molecule AFM, «BIOPHYSICAL JOURNAL», 2006, 91, pp. 3579 - 3588 [articolo]

Seeber M.; Fanelli F.; Paci E.; Caflisch A., Sequential unfolding of individual helices of bacterioopsin observed in molecular dynamics simulations of extraction from the purple membrane, «BIOPHYSICAL JOURNAL», 2006, 91, pp. 3276 - 3284 [articolo]

Geierhaas C.D.; Best R.B.; Paci E.; Vendruscolo M.; Clarke J., Structural comparison of the two alternative transition states for folding of TI I27, «BIOPHYSICAL JOURNAL», 2006, 91, pp. 263 - 275 [articolo]

Curcio R.; Caflisch A.; Paci E., Change of the unbinding mechanism upon a mutation: A molecular dynamics study of an antibody-hapten complex, «PROTEIN SCIENCE», 2005, 14, pp. 2499 - 2514 [articolo]

Paci E.; Greene L.H.; Jones R.M.; Smith L.J., Characterization of the molten globule state of retinol-binding protein using a molecular dynamics simulation approach, «THE FEBS JOURNAL», 2005, 272, pp. 4826 - 4838 [articolo]

Cavalli A.; Vendruscolo M.; Paci E., Comparison of sequence-based and structure-based energy functions for the reversible folding of a peptide, «BIOPHYSICAL JOURNAL», 2005, 88, pp. 3158 - 3166 [articolo]

Ng S.P.; Rounsevell R.W.S.; Steward A.; Geierhaas C.D.; Williams P.M.; Paci E.; Clarke J., Mechanical unfolding of TNfn3: The unfolding pathway of a fnIII domain probed by protein engineering, AFM and MD simulation, «JOURNAL OF MOLECULAR BIOLOGY», 2005, 350, pp. 776 - 789 [articolo]

Brockwell D.J.; Beddard G.S.; Paci E.; West D.K.; Olmsted P.D.; Smith D.A.; Radford S.E., Mechanically unfolding the small, topologically simple protein L, «BIOPHYSICAL JOURNAL», 2005, 89, pp. 506 - 519 [articolo]

Forman J.R.; Qamar S.; Paci E.; Sandford R.N.; Clarke J., The remarkable mechanical strength of polycystin-1 supports a direct role in mechanotransduction, «JOURNAL OF MOLECULAR BIOLOGY», 2005, 349, pp. 861 - 871 [articolo]

Paci E.; Lindorff-Larsen K.; Dobson C.M.; Karplus M.; Vendruscolo M., Transition state contact orders correlate with protein folding rates, «JOURNAL OF MOLECULAR BIOLOGY», 2005, 352, pp. 495 - 500 [articolo]

Lindorff-Larsen K.; Vendruscolo M.; Paci E.; Dobson C.M., Transition states for protein folding have native topologies despite high structural variability, «NATURE STRUCTURAL & MOLECULAR BIOLOGY», 2004, 11, pp. 443 - 449 [articolo]

Paci E.; Cavalli A.; Vendruscolo M.; Caflisch A., Analysis of the distributed computing approach applied to the folding of a small β peptide, «PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA», 2003, 100, pp. 8217 - 8222 [articolo]

Brockwell D.J.; Paci E.; Zinober R.C.; Beddard G.S.; Olmsted P.D.; Smith D.A.; Perham R.N.; Radford S.E., Pulling geometry defines the mechanical resistance of a β-sheet protein, «NATURE STRUCTURAL BIOLOGY», 2003, 10, pp. 731 - 737 [articolo]

Vendruscolo M.; Paci E.; Dobson C.M.; Karplus M., Rare Fluctuations of Native Proteins Sampled by Equilibrium Hydrogen Exchange, «JOURNAL OF THE AMERICAN CHEMICAL SOCIETY», 2003, 125, pp. 15686 - 15687 [articolo]

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