Savojardo, Castrense; Babbi, Giulia; Martelli, Pier Luigi; Casadio, Rita, Functional and Structural Features of Disease-Related Protein Variants, «INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES», 2019, 20, Article number: 1530, pp. 1530 - 1544 [articolo]Open Access
Vera Vendramin, Danara Ormanbekova, Simone Scalabrin, Davide Scaglione, Marco Maccaferri, Pier Luigi Martelli, Silvio Salvi, Irena Jurman, Rita Casadio, Federica Cattonaro, Roberto Tuberosa, Andrea Massi, Michele Morgante, Genomic tools for durum wheat breeding: de novo assembly of Svevo transcriptome and SNP discovery in elite germplasm, «BMC GENOMICS», 2019, 20, Article number: 278, pp. 1 - 16 [articolo]Open Access
Margherita Nannini, Giuseppe Tarantino , Valentina Indio, Gloria Ravegnini, Annalisa Astolfi, Milena Urbini, Antonio De Leo, Donatella Santini, Claudio Ceccarelli, Elisa Gruppioni, Annalisa Altimari, Paolo Castellucci, Stefano Fanti, Valerio Di Scioscio, Maristella Saponara, Lidia Gatto, Andrea Pession, Pier Luigi Martelli, Rita Casadio, Maria Abbondanza Pantaleo, Molecular modelling evaluation of exon 18 His845_Asn848delinsPro pDGFRα mutation in a metastatic GIST patient responding to imatinib, «SCIENTIFIC REPORTS», 2019, 9, pp. 2172 - 2178 [articolo]Open Access
Montanucci, Ludovica; Savojardo, Castrense; Martelli, Pier Luigi; Casadio, Rita; Fariselli, Piero, On the biases in predictions of protein stability changes upon variations: the INPS test case, «BIOINFORMATICS», 2019, 35, pp. 2525 - 2527 [articolo]
Monzon A.M.; Carraro M.; Chiricosta L.; Reggiani F.; Han J.; Ozturk K.; Wang Y.; Miller M.; Bromberg Y.; Capriotti E.; Savojardo C.; Babbi G.; Martelli P.L.; Casadio R.; Katsonis P.; Lichtarge O.; Carter H.; Kousi M.; Katsanis N.; Andreoletti G.; Moult J.; Brenner S.E.; Ferrari C.; Leonardi E.; Tosatto S.C.E., Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI-5, «HUMAN MUTATION», 2019, 40, pp. 1474 - 1485 [articolo]
Babbi G, Martelli P, Casadio R, PhenPath: A tool for characterizing biological functions underlying different phenotypes, «BMC GENOMICS», 2019, 20, Article number: 548, pp. 1 - 11 [articolo]Open Access
McInnes, Gregory; Daneshjou, Roxana; Katsonis, Panagiostis; Lichtarge, Olivier; Srinivasan, Raj G; Rana, Sadhna; Radivojac, Predrag; Mooney, Sean D; Pagel, Kymberleigh A; Stamboulian, Moses; Jiang, Yuxiang; Capriotti, Emidio; Wang, Yanran; Bromberg, Yana; Bovo, Samuele; Savojardo, Castrense; Martelli, Pier Luigi; Casadio, Rita; Pal, Lipika R; Moult, John; Brenner, Steven; Altman, Russ, Predicting venous thromboembolism risk from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges, «HUMAN MUTATION», 2019, 40, pp. 1314 - 1320 [articolo]
Zhou N.; Jiang Y.; Bergquist T.R.; Lee A.J.; Kacsoh B.Z.; Crocker A.W.; Lewis K.A.; Georghiou G.; Nguyen H.N.; Hamid M.N.; Davis L.; Dogan T.; Atalay V.; Rifaioglu A.S.; Dalklran A.; Cetin Atalay R.; Zhang C.; Hurto R.L.; Freddolino P.L.; Zhang Y.; Bhat P.; Supek F.; Fernandez J.M.; Gemovic B.; Perovic V.R.; Davidovic R.S.; Sumonja N.; Veljkovic N.; Asgari E.; Mofrad M.R.K.; Profiti G.; Savojardo C.; Martelli P.L.; Casadio R.; Boecker F.; Schoof H.; Kahanda I.; Thurlby N.; McHardy A.C.; Renaux A.; Saidi R.; Gough J.; Freitas A.A.; Antczak M.; Fabris F.; Wass M.N.; Hou J.; Cheng J.; Wang Z.; Romero A.E.; Paccanaro A.; Yang H.; Goldberg T.; Zhao C.; Holm L.; Toronen P.; Medlar A.J.; Zosa E.; Borukhov I.; Novikov I.; Wilkins A.; Lichtarge O.; Chi P.-H.; Tseng W.-C.; Linial M.; Rose P.W.; Dessimoz C.; Vidulin V.; Dzeroski S.; Sillitoe I.; Das S.; Lees J.G.; Jones D.T.; Wan C.; Cozzetto D.; Fa R.; Torres M.; Warwick Vesztrocy A.; Rodriguez J.M.; Tress M.L.; Frasca M.; Notaro M.; Grossi G.;, The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens, «GENOME BIOLOGY», 2019, 20, Article number: 244, pp. 1 - 23 [articolo]Open Access
Savojardo, Castrense; Martelli, Pier Luigi*; Fariselli, Piero; Profiti, Giuseppe; Casadio, Rita, BUSCA: An integrative web server to predict subcellular localization of proteins, «NUCLEIC ACIDS RESEARCH», 2018, 46, pp. W459 - W466 [articolo]Open Access
Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Profiti, Giuseppe; Casadio, Rita, BUSCA is a web server for predicting subcellular localization of proteins, 2018. [software]
Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, DeepSig: deep learning improves signal peptide detection in proteins, «BIOINFORMATICS», 2018, 34, pp. 1690 - 1696 [articolo]Open Access
Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Casadio, Rita, DeepSig is a software package and web server to predict signal peptides in proteins, 2018. [software]
Martelli PL, Profiti G, Casadio R, Savojardo C, Integrating ELIXIR Italy with ELIXIR Interoperability platform activities, in: F1000 Research, 2018(atti di: ELIXIR All-hands meeting, Berlino, 4-7 giugno 2018) [atti di convegno-poster]Open Access
Diquigiovanni, Chiara; Bergamini, Christian; Evangelisti, Cecilia; Isidori, Federica; Vettori, Andrea; Tiso, Natascia; Argenton, Francesco; Costanzini, Anna; Iommarini, Luisa; Anbunathan, Hima; Pagotto, Uberto; Repaci, Andrea; Babbi, Giulia; Casadio, Rita; Lenaz, Giorgio; Rhoden, Kerry J.; Porcelli, Anna Maria; Fato, Romana; Bowcock, Anne; Seri, Marco; Romeo, Giovanni; Bonora, Elena, Mutant MYO1F alters the mitochondrial network and induces tumor proliferation in thyroid cancer, «INTERNATIONAL JOURNAL OF CANCER», 2018, 143, pp. 1706 - 1719 [articolo]Open Access
Pier Luigi Martelli, Castrense Savojardo, Giuseppe Profiti, Rita Casadio, Transmembrane Domain Prediction, in: Encyclopedia of Bioinformatics and Computational Biology, Oxford, Academic Press, 2018, pp. 46 - 52 [capitolo di libro]
